We consider threshold group testing – a generalization of a well known and thoroughly examined problem of combinatorial group testing. In the classical setting, the goal is to identify a set of positive individuals in a population, by performing tests on pools of elements. The output of each test is an answer to the question: is there at least one positive element inside a query set Q? The threshold group testing is a natural generalization of this classical setting which arises when the answer to a test is positive if at least t > 0 elements under test are positive. We show that there exists a testing strategy for the threshold group testing consisting of (formula presented ) tests, for d positive items in a population of size N. For any value of the threshold t, we also provide a lower bound of order (formula presented). Our subquadratic bound shows a complexity separation with the classical group testing (which corresponds to t = 1) where Ω(d2logdN) tests are needed [25]. Next, we introduce a further generalization, the multi-threshold group testing problem. In this setting, we have a set of s > 0 thresholds, t1, t2, …, ts. The output of each test is an integer between 0 and s which corresponds to which thresholds get passed by the number of positives in the queried pool. Here, one may be interested in minimizing not only the number of tests, but also the number of thresholds which is related to the accuracy of the tests. We show the existence of two strategies for this problem. The first one of size (formula presented ) is an extension of the above-mentioned result. The second strategy is more general and works for a range of parameters. As a consequence, we show that (formula presented ) tests are sufficient for t ≤ d/2. Both strategies use respectively O(√d) and O(√t) thresholds.

Subquadratic non-adaptive threshold group testing

De Marco, Gianluca
;
2017-01-01

Abstract

We consider threshold group testing – a generalization of a well known and thoroughly examined problem of combinatorial group testing. In the classical setting, the goal is to identify a set of positive individuals in a population, by performing tests on pools of elements. The output of each test is an answer to the question: is there at least one positive element inside a query set Q? The threshold group testing is a natural generalization of this classical setting which arises when the answer to a test is positive if at least t > 0 elements under test are positive. We show that there exists a testing strategy for the threshold group testing consisting of (formula presented ) tests, for d positive items in a population of size N. For any value of the threshold t, we also provide a lower bound of order (formula presented). Our subquadratic bound shows a complexity separation with the classical group testing (which corresponds to t = 1) where Ω(d2logdN) tests are needed [25]. Next, we introduce a further generalization, the multi-threshold group testing problem. In this setting, we have a set of s > 0 thresholds, t1, t2, …, ts. The output of each test is an integer between 0 and s which corresponds to which thresholds get passed by the number of positives in the queried pool. Here, one may be interested in minimizing not only the number of tests, but also the number of thresholds which is related to the accuracy of the tests. We show the existence of two strategies for this problem. The first one of size (formula presented ) is an extension of the above-mentioned result. The second strategy is more general and works for a range of parameters. As a consequence, we show that (formula presented ) tests are sufficient for t ≤ d/2. Both strategies use respectively O(√d) and O(√t) thresholds.
2017
9783662557501
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11386/4700308
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